STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGB26623.1Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter membrane protein, PAAT family. (589 aa)    
Predicted Functional Partners:
AGB26624.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 0.998
AGB23327.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 0.949
AGB26249.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 0.938
AGB22896.1
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter.
 0.934
AGB26248.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Binding-protein-dependent transport system inner membrane component; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; amino acid ABC transporter membrane protein, PAAT family.
 
0.927
AGB23326.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
0.897
AGB22893.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
0.843
AGB22894.1
PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family.
 
0.840
AGB26622.1
PFAM: Bacterial regulatory proteins, gntR family; FCD domain.
     
 0.817
AGB22895.1
Amino acid ABC transporter substrate-binding protein, PAAT family; PFAM: Bacterial extracellular solute-binding proteins, family 3.
  
  
  0.714
Your Current Organism:
Mycobacterium sp. JS623
NCBI taxonomy Id: 212767
Other names: M. sp. JS623
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