Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
spiSpiralin; Major membrane protein of spiroplasma; Belongs to the spiralin family. (241 aa)    
Predicted Functional Partners:
sc76
ABC-type transport system substrate-binding protein.
      
 0.587
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.566
fib
Fibril protein; Acts as a cytoskeletal structure involved in the shape and motility of spiroplasmas.
      
 0.563
sc76-2
ABC-type transport system substrate-binding protein.
      
 0.548
tsf
Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (By similarity); Belongs to the EF-Ts family.
     
 0.515
APE75012.1
Hypothetical protein.
     
 0.500
APE74312.1
Putative NAD(FAD)-dependent dehydrogenase.
      
 0.490
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
     
 0.486
nox2
NADH oxidase.
      
 0.482
nox3
NADH oxidase.
      
 0.482
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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