Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE75025.1 | APE75026.1 | SCITRI_001143 | SCITRI_001144 | Hypothetical protein. | Hypothetical protein. | 0.961 |
| APE75025.1 | ftsA | SCITRI_001143 | SCITRI_001146 | Hypothetical protein. | Cell division protein FtsA. | 0.726 |
| APE75025.1 | ftsZ | SCITRI_001143 | SCITRI_001145 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.858 |
| APE75025.1 | mraZ | SCITRI_001143 | SCITRI_001148 | Hypothetical protein. | Hypothetical protein; Belongs to the MraZ family. | 0.617 |
| APE75025.1 | smtA | SCITRI_001143 | SCITRI_001147 | Hypothetical protein. | Putative S-adenosylmethionine-dependent methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.635 |
| APE75026.1 | APE75025.1 | SCITRI_001144 | SCITRI_001143 | Hypothetical protein. | Hypothetical protein. | 0.961 |
| APE75026.1 | APE75425.1 | SCITRI_001144 | SCITRI_001550 | Hypothetical protein. | Hypothetical protein. | 0.593 |
| APE75026.1 | ftsA | SCITRI_001144 | SCITRI_001146 | Hypothetical protein. | Cell division protein FtsA. | 0.909 |
| APE75026.1 | ftsZ | SCITRI_001144 | SCITRI_001145 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.977 |
| APE75026.1 | mraZ | SCITRI_001144 | SCITRI_001148 | Hypothetical protein. | Hypothetical protein; Belongs to the MraZ family. | 0.734 |
| APE75026.1 | smtA | SCITRI_001144 | SCITRI_001147 | Hypothetical protein. | Putative S-adenosylmethionine-dependent methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA. | 0.683 |
| APE75425.1 | APE75026.1 | SCITRI_001550 | SCITRI_001144 | Hypothetical protein. | Hypothetical protein. | 0.593 |
| APE75425.1 | ftsA | SCITRI_001550 | SCITRI_001146 | Hypothetical protein. | Cell division protein FtsA. | 0.749 |
| APE75425.1 | ftsZ | SCITRI_001550 | SCITRI_001145 | Hypothetical protein. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.750 |
| fib | ftsA | SCITRI_00717 | SCITRI_001146 | Fibril protein; Acts as a cytoskeletal structure involved in the shape and motility of spiroplasmas. | Cell division protein FtsA. | 0.820 |
| fib | ftsZ | SCITRI_00717 | SCITRI_001145 | Fibril protein; Acts as a cytoskeletal structure involved in the shape and motility of spiroplasmas. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.820 |
| fib | mreB2 | SCITRI_00717 | SCITRI_001910 | Fibril protein; Acts as a cytoskeletal structure involved in the shape and motility of spiroplasmas. | Cell shape determining protein MreB2. | 0.419 |
| fib | mreB3 | SCITRI_00717 | SCITRI_001911 | Fibril protein; Acts as a cytoskeletal structure involved in the shape and motility of spiroplasmas. | Cell shape determining protein MreB3. | 0.419 |
| ftsA | APE75025.1 | SCITRI_001146 | SCITRI_001143 | Cell division protein FtsA. | Hypothetical protein. | 0.726 |
| ftsA | APE75026.1 | SCITRI_001146 | SCITRI_001144 | Cell division protein FtsA. | Hypothetical protein. | 0.909 |
page 1 of 3