Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APE74056.1 | APE74057.1 | SCITRI_00142 | SCITRI_00143 | Hypothetical protein. | Outer surface protein. | 0.429 |
APE74057.1 | APE74056.1 | SCITRI_00143 | SCITRI_00142 | Outer surface protein. | Hypothetical protein. | 0.429 |
APE74057.1 | APE74058.1 | SCITRI_00143 | SCITRI_00144 | Outer surface protein. | Hypothetical protein. | 0.432 |
APE74057.1 | celB | SCITRI_00143 | SCITRI_001407 | Outer surface protein. | PTS system cellobiose-specific component IIC. | 0.785 |
APE74057.1 | celC | SCITRI_00143 | SCITRI_001353 | Outer surface protein. | PTS system cellobiose-specific IIA component. | 0.444 |
APE74057.1 | licA | SCITRI_00143 | SCITRI_00127 | Outer surface protein. | Lichenan-specific PTS system IIA component. | 0.774 |
APE74058.1 | APE74057.1 | SCITRI_00144 | SCITRI_00143 | Hypothetical protein. | Outer surface protein. | 0.432 |
celB | APE74057.1 | SCITRI_001407 | SCITRI_00143 | PTS system cellobiose-specific component IIC. | Outer surface protein. | 0.785 |
celB | celC | SCITRI_001407 | SCITRI_001353 | PTS system cellobiose-specific component IIC. | PTS system cellobiose-specific IIA component. | 0.971 |
celB | licA | SCITRI_001407 | SCITRI_00127 | PTS system cellobiose-specific component IIC. | Lichenan-specific PTS system IIA component. | 0.886 |
celC | APE74057.1 | SCITRI_001353 | SCITRI_00143 | PTS system cellobiose-specific IIA component. | Outer surface protein. | 0.444 |
celC | celB | SCITRI_001353 | SCITRI_001407 | PTS system cellobiose-specific IIA component. | PTS system cellobiose-specific component IIC. | 0.971 |
celC | licA | SCITRI_001353 | SCITRI_00127 | PTS system cellobiose-specific IIA component. | Lichenan-specific PTS system IIA component. | 0.976 |
licA | APE74057.1 | SCITRI_00127 | SCITRI_00143 | Lichenan-specific PTS system IIA component. | Outer surface protein. | 0.774 |
licA | celB | SCITRI_00127 | SCITRI_001407 | Lichenan-specific PTS system IIA component. | PTS system cellobiose-specific component IIC. | 0.886 |
licA | celC | SCITRI_00127 | SCITRI_001353 | Lichenan-specific PTS system IIA component. | PTS system cellobiose-specific IIA component. | 0.976 |