Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE75689.1 | sufB | SCITRI_001823 | SCITRI_001825 | Hypothetical protein. | FeS assembly protein SufB. | 0.530 |
| APE75689.1 | sufC | SCITRI_001823 | SCITRI_001829 | Hypothetical protein. | FeS assembly ATPase SufC. | 0.555 |
| APE75689.1 | sufD | SCITRI_001823 | SCITRI_001828 | Hypothetical protein. | ABC-type iron-sulfur cluster assembly transport system permease protein. | 0.495 |
| APE75689.1 | sufS | SCITRI_001823 | SCITRI_001827 | Hypothetical protein. | Cysteine desulfurase. | 0.535 |
| APE75689.1 | sufU | SCITRI_001823 | SCITRI_001826 | Hypothetical protein. | FeS assembly protein. | 0.516 |
| APE75689.1 | yqgN | SCITRI_001823 | SCITRI_001824 | Hypothetical protein. | 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. | 0.504 |
| dxr | dxs | SCITRI_00482 | SCITRI_00843 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.994 |
| dxr | fhs | SCITRI_00482 | SCITRI_001309 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Putative formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.528 |
| dxr | oppF | SCITRI_00482 | SCITRI_00701 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.686 |
| dxr | sufB | SCITRI_00482 | SCITRI_001825 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | FeS assembly protein SufB. | 0.683 |
| dxs | dxr | SCITRI_00843 | SCITRI_00482 | 1-deoxy-D-xylulose-5-phosphate synthase. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.994 |
| dxs | fhs | SCITRI_00843 | SCITRI_001309 | 1-deoxy-D-xylulose-5-phosphate synthase. | Putative formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 0.569 |
| dxs | oppF | SCITRI_00843 | SCITRI_00701 | 1-deoxy-D-xylulose-5-phosphate synthase. | Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 0.669 |
| dxs | sufB | SCITRI_00843 | SCITRI_001825 | 1-deoxy-D-xylulose-5-phosphate synthase. | FeS assembly protein SufB. | 0.683 |
| fhs | dxr | SCITRI_001309 | SCITRI_00482 | Putative formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.528 |
| fhs | dxs | SCITRI_001309 | SCITRI_00843 | Putative formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.569 |
| fhs | sufB | SCITRI_001309 | SCITRI_001825 | Putative formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family. | FeS assembly protein SufB. | 0.591 |
| oppF | dxr | SCITRI_00701 | SCITRI_00482 | Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 0.686 |
| oppF | dxs | SCITRI_00701 | SCITRI_00843 | Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | 1-deoxy-D-xylulose-5-phosphate synthase. | 0.669 |
| oppF | sufB | SCITRI_00701 | SCITRI_001825 | Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. | FeS assembly protein SufB. | 0.513 |
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