STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE75707.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
cbiQ
ABC-type cobalt transport system permease protein.
  
 
 0.807
cbiO1
ABC-type cobalt transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
 0.778
APE74521.1
Putative ABC-type transport system permease protein.
  
     0.771
APE75351.1
ABC-type transport system permease protein.
  
     0.765
APE75036.1
ABC transporter permease.
  
     0.752
rpmC
50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
     0.752
cbiO2
ABC-type cobalt transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
   
 
 0.738
APE74612.1
Hypothetical protein.
  
     0.697
yidC
Putative inner membrane protein translocase component YidC.
  
     0.662
APE75740.1
ABC-type transport system permease protein.
  
     0.633
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.