Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
APE74174.1Endonuclease. (192 aa)    
Predicted Functional Partners:
yxlJ
3-methyladenine DNA glycosylase; Belongs to the DNA glycosylase MPG family.
      0.931
yacO
tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.
      0.797
APE75068.1
Putative single-strand binding protein SSB.
      
 0.618
APE75099.1
Putative single-strand binding protein SSB.
      
 0.618
APE75599.1
Putative single-strand binding protein SSB.
      
 0.618
ssb
Putative single-strand DNA-binding protein.
      
 0.618
ssb-2
Putative single-strand binding protein SSB.
      
 0.618
nusG
Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.
       0.617
APE74171.1
Hypothetical protein; Belongs to the SecE/SEC61-gamma family.
       0.540
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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