Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APE74214.1 | arcA | SCITRI_00303 | SCITRI_00304 | Hypothetical protein. | Arginine deiminase. | 0.567 |
| APE74214.1 | arcB | SCITRI_00303 | SCITRI_00305 | Hypothetical protein. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.555 |
| arcA | APE74214.1 | SCITRI_00304 | SCITRI_00303 | Arginine deiminase. | Hypothetical protein. | 0.567 |
| arcA | arcB | SCITRI_00304 | SCITRI_00305 | Arginine deiminase. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.999 |
| arcA | arcC | SCITRI_00304 | SCITRI_00307 | Arginine deiminase. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.908 |
| arcA | arcD | SCITRI_00304 | SCITRI_00306 | Arginine deiminase. | Arginine/ornithine antiporter. | 0.671 |
| arcA | argS | SCITRI_00304 | SCITRI_00448 | Arginine deiminase. | arginyl-tRNA synthetase. | 0.431 |
| arcA | crr | SCITRI_00304 | SCITRI_001785 | Arginine deiminase. | PTS system glucose-specific IIA component. | 0.784 |
| arcA | gpmI | SCITRI_00304 | SCITRI_00430 | Arginine deiminase. | Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.591 |
| arcA | metK | SCITRI_00304 | SCITRI_00168 | Arginine deiminase. | S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.613 |
| arcA | pfs | SCITRI_00304 | SCITRI_001021 | Arginine deiminase. | 5'-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. | 0.737 |
| arcB | APE74214.1 | SCITRI_00305 | SCITRI_00303 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Hypothetical protein. | 0.555 |
| arcB | arcA | SCITRI_00305 | SCITRI_00304 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine deiminase. | 0.999 |
| arcB | arcC | SCITRI_00305 | SCITRI_00307 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Carbamate kinase; Belongs to the carbamate kinase family. | 0.995 |
| arcB | arcD | SCITRI_00305 | SCITRI_00306 | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Arginine/ornithine antiporter. | 0.889 |
| arcC | arcA | SCITRI_00307 | SCITRI_00304 | Carbamate kinase; Belongs to the carbamate kinase family. | Arginine deiminase. | 0.908 |
| arcC | arcB | SCITRI_00307 | SCITRI_00305 | Carbamate kinase; Belongs to the carbamate kinase family. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.995 |
| arcC | arcD | SCITRI_00307 | SCITRI_00306 | Carbamate kinase; Belongs to the carbamate kinase family. | Arginine/ornithine antiporter. | 0.952 |
| arcD | arcA | SCITRI_00306 | SCITRI_00304 | Arginine/ornithine antiporter. | Arginine deiminase. | 0.671 |
| arcD | arcB | SCITRI_00306 | SCITRI_00305 | Arginine/ornithine antiporter. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | 0.889 |
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