STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
treRHypothetical protein. (329 aa)    
Predicted Functional Partners:
treP
Phosphotransferase system PTS,trehalose specific IIBC component.
 
  
 0.961
treA
Trehalose-6-phosphate hydrolase.
  
  
 0.937
ptsH
Phosphocarrier protein Hpr.
   
 
 0.912
crr
PTS system glucose-specific IIA component.
  
  
 0.839
APE74369.1
Putative Hypothetical transmembrane protein.
       0.773
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
   0.767
pheT
phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
   0.751
ptsG
PTS sugar transporter.
  
  
 0.742
hupB
DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
  
 
 0.720
APE75465.1
PTS system, fructose-specific IIABC components.
     
 0.697
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.