rpoD protein (Spiroplasma citri) - STRING interaction network

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Score

rpoD

RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family. (445 aa)

Predicted Functional Partners:

dnaG

0.992

rpoB

0.975

rpoC

0.975

rpoA-2

0.863

nusA

0.859

fur

0.840

dnaK

0.822

groL

0.821

rpoA

0.818

APE74183.1

0.806

Your Current Organism:

Spiroplasma citri

NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE74183.1	rpoA	SCITRI_00272	SCITRI_00249	DNA directed RNA polymerase subunit delta.	DNA-directed RNA polymerase subunit alpha.	0.712
APE74183.1	rpoA-2	SCITRI_00272	SCITRI_00355	DNA directed RNA polymerase subunit delta.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.712
APE74183.1	rpoB	SCITRI_00272	SCITRI_0093	DNA directed RNA polymerase subunit delta.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.748
APE74183.1	rpoC	SCITRI_00272	SCITRI_0094	DNA directed RNA polymerase subunit delta.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.782
APE74183.1	rpoD	SCITRI_00272	SCITRI_00490	DNA directed RNA polymerase subunit delta.	RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family.	0.806
dnaG	nusA	SCITRI_00489	SCITRI_001601	Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	0.421
dnaG	rpoB	SCITRI_00489	SCITRI_0093	Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.410
dnaG	rpoC	SCITRI_00489	SCITRI_0094	Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.485
dnaG	rpoD	SCITRI_00489	SCITRI_00490	Putative DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family.	0.992
dnaK	groL	SCITRI_001691	SCITRI_00825	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.	0.990
dnaK	rpoA	SCITRI_001691	SCITRI_00249	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit alpha.	0.745
dnaK	rpoA-2	SCITRI_001691	SCITRI_00355	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.745
dnaK	rpoB	SCITRI_001691	SCITRI_0093	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.621
dnaK	rpoC	SCITRI_001691	SCITRI_0094	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.469
dnaK	rpoD	SCITRI_001691	SCITRI_00490	Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.	RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family.	0.822
fur	rpoA	SCITRI_001755	SCITRI_00249	Fur family transcriptional regulator; Belongs to the Fur family.	DNA-directed RNA polymerase subunit alpha.	0.776
fur	rpoA-2	SCITRI_001755	SCITRI_00355	Fur family transcriptional regulator; Belongs to the Fur family.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.776
fur	rpoB	SCITRI_001755	SCITRI_0093	Fur family transcriptional regulator; Belongs to the Fur family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
fur	rpoC	SCITRI_001755	SCITRI_0094	Fur family transcriptional regulator; Belongs to the Fur family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.757
fur	rpoD	SCITRI_001755	SCITRI_00490	Fur family transcriptional regulator; Belongs to the Fur family.	RNA polymerase sigma factor RpoD; Belongs to the sigma-70 factor family.	0.840