STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APE74521.1Putative ABC-type transport system permease protein. (1362 aa)    
Predicted Functional Partners:
APE73936.1
ABC transporter ATP-binding protein.
 
 
 0.897
APE75036.1
ABC transporter permease.
  
     0.771
APE75707.1
Hypothetical protein.
  
     0.771
APE74522.1
Putative lipoprotein.
       0.746
APE74520.1
Putative transmembrane protein.
       0.664
APE74612.1
Hypothetical protein.
  
     0.609
APE75145.1
Hypothetical protein.
  
    0.590
rpmC
50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
 
     0.563
APE74183.1
DNA directed RNA polymerase subunit delta.
  
     0.530
APE74148.1
Amino acid permease.
 
    0.521
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.