Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APE74569.1Hypothetical protein. (588 aa)    
Predicted Functional Partners:
APE74570.1
Bacteriophage portal protein.
   
 
 0.859
APE74564.1
Hypothetical protein.
 
     0.841
APE74567.1
Hypothetical protein.
  
   0.828
APE74568.1
Hypothetical protein.
       0.705
APE74565.1
Hypothetical protein.
       0.700
APE74566.1
Hypothetical protein.
       0.700
APE74563.1
Hypothetical protein.
       0.672
APE75107.1
Bacteriophage terminase-like protein, large subunit.
 
     0.580
APE75052.1
Hypothetical protein.
 
     0.535
APE75500.1
Hypothetical protein.
 
     0.535
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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