STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
oppFOligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily. (744 aa)    
Predicted Functional Partners:
oppB
Oligopeptide ABC transporter permease.
 
 0.999
oppC
Oligopeptide ABC transporter permease.
 0.999
oppA
Oligopeptide ABC transporter substrate-binding protein.
 
 0.998
oppD
Oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
0.993
cbiO1
ABC-type cobalt transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
0.947
APE73936.1
ABC transporter ATP-binding protein.
 
 
   
0.902
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.899
cbiO2
ABC-type cobalt transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
0.888
cbiQ
ABC-type cobalt transport system permease protein.
 
 
 0.865
APE74599.1
Hypothetical protein.
       0.773
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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