Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
traE-2Putative membrane-bound ATPase. (66 aa)    
Predicted Functional Partners:
APE74002.1
Putative membrane-bound ATPase.
     0.950
APE73999.1
Putative membrane-bound ATPase.
      0.779
traE
Putative membrane-bound ATPase.
      0.769
virD4
Type IV secretion system protein VirD4.
 
  
 0.706
APE74006.1
TraG family protein.
 
  
 0.632
APE73997.1
Hypothetical protein.
 
      0.542
APE75685.1
TraG family protein.
 
  
 0.519
APE74054.1
TraG family protein.
 
  
 0.488
APE74003.1
Hypothetical protein.
       0.465
APE73998.1
Hypothetical protein.
       0.404
Your Current Organism:
Spiroplasma citri
NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri
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