nusB protein (Spiroplasma citri) - STRING interaction network

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Score

nusB

Transcription antitermination protein. (126 aa)

Predicted Functional Partners:

nusG

0.849

rpsJ

0.758

nusA

0.748

APE74708.1

0.741

rpoB

0.647

greA

0.629

rpoC

0.577

rpsD

0.574

rpoA

0.545

rpoA-2

0.545

Your Current Organism:

Spiroplasma citri

NCBI taxonomy Id: 2133
Other names: ATCC 27556, NCPPB 2647, S. citri

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APE74708.1	nusB	SCITRI_00815	SCITRI_00816	Hypothetical protein.	Transcription antitermination protein.	0.741
greA	nusA	SCITRI_00711	SCITRI_001601	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	0.538
greA	nusB	SCITRI_00711	SCITRI_00816	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Transcription antitermination protein.	0.629
greA	nusG	SCITRI_00711	SCITRI_00261	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.	0.701
greA	rpoA	SCITRI_00711	SCITRI_00249	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase subunit alpha.	0.862
greA	rpoA-2	SCITRI_00711	SCITRI_00355	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.862
greA	rpoB	SCITRI_00711	SCITRI_0093	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.920
greA	rpoC	SCITRI_00711	SCITRI_0094	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.916
greA	rpsD	SCITRI_00711	SCITRI_001551	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.443
nusA	greA	SCITRI_001601	SCITRI_00711	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.538
nusA	nusB	SCITRI_001601	SCITRI_00816	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	Transcription antitermination protein.	0.748
nusA	nusG	SCITRI_001601	SCITRI_00261	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.	0.925
nusA	rpoA	SCITRI_001601	SCITRI_00249	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit alpha.	0.919
nusA	rpoA-2	SCITRI_001601	SCITRI_00355	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.933
nusA	rpoB	SCITRI_001601	SCITRI_0093	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.949
nusA	rpoC	SCITRI_001601	SCITRI_0094	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.923
nusA	rpsD	SCITRI_001601	SCITRI_001551	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.	0.833
nusA	rpsJ	SCITRI_001601	SCITRI_00330	Transcription elongation factor NusA; Participates in both transcription termination and antitermination.	30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.902
nusB	APE74708.1	SCITRI_00816	SCITRI_00815	Transcription antitermination protein.	Hypothetical protein.	0.741
nusB	greA	SCITRI_00816	SCITRI_00711	Transcription antitermination protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.629