Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIA73470.1Ammonia monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
AIA73469.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.797
AIA73468.1
NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.605
AIA73471.1
Kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.581
AIA74248.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.511
AIA74250.1
Tricarboxylic transport membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.492
AIA73472.1
DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.
       0.459
AIA74028.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.450
AIA74686.1
Biofilm formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.430
AIA74249.1
Tricarboxylic transporter TctB (4TM)subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.426
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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