Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIA73626.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (310 aa)    
Predicted Functional Partners:
AIA73625.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.852
AIA73624.1
2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
AIA73627.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.650
AIA76186.1
Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.632
AIA73623.1
X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.507
AIA73622.1
Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.474
AIA76052.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
  
    0.461
AIA73621.1
AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.457
AIA75965.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.434
AIA74696.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.416
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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