Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIA73646.1GfdT protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (387 aa)    
Predicted Functional Partners:
AIA74056.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.905
AIA73645.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.885
AIA73647.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.833
AIA73648.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.802
AIA74055.1
Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.754
AIA74054.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.717
AIA75827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.606
AIA73649.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.579
AIA74037.1
Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.543
AIA74053.1
Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.541
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.