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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIA73887.1Nucleoid-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)    
Predicted Functional Partners:
AIA73888.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
AIA73889.1
Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.754
AIA73886.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.749
AIA73885.1
Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.710
AIA73890.1
Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.698
AIA76245.1
VRR-NUC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
AIA73702.1
Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.
  
     0.562
AIA75398.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
AIA73998.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.525
AIA75524.1
Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.521
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.