STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIA74114.1C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (474 aa)    
Predicted Functional Partners:
AIA74115.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.767
AIA74113.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.759
AIA75297.1
Carbamate kinase; Reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.639
AIA75295.1
Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.628
AIA75296.1
Catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.542
AIA74116.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.