STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIA74230.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (515 aa)    
Predicted Functional Partners:
AIA74229.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.784
AIA74231.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.778
AIA74226.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.738
ureD
Urease accessory protein ureD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
       0.562
AIA73512.1
Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.545
AIA74299.1
Ferrioxamine B receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.522
AIA76443.1
Copper resistance protein CopA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.507
AIA75332.1
RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.427
AIA76444.1
Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.426
AIA74543.1
Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.408
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.