Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AIA74391.1 | AIA74392.1 | FF32_05880 | FF32_05885 | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.750 |
AIA74391.1 | AIA75818.1 | FF32_05880 | FF32_13500 | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
AIA74391.1 | gmk | FF32_05880 | FF32_05895 | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.687 |
AIA74391.1 | rpoZ | FF32_05880 | FF32_05890 | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.714 |
AIA74392.1 | AIA74391.1 | FF32_05885 | FF32_05880 | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.750 |
AIA74392.1 | gmk | FF32_05885 | FF32_05895 | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.976 |
AIA74392.1 | rpoZ | FF32_05885 | FF32_05890 | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.847 |
AIA75818.1 | AIA74391.1 | FF32_13500 | FF32_05880 | Translation initiation inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.772 |
gmk | AIA74391.1 | FF32_05895 | FF32_05880 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.687 |
gmk | AIA74392.1 | FF32_05895 | FF32_05885 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.976 |
gmk | rpoZ | FF32_05895 | FF32_05890 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.981 |
rpoZ | AIA74391.1 | FF32_05890 | FF32_05880 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.714 |
rpoZ | AIA74392.1 | FF32_05890 | FF32_05885 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.847 |
rpoZ | gmk | FF32_05890 | FF32_05895 | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.981 |