Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AIA74976.1Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology. (438 aa)    
Predicted Functional Partners:
AIA74977.1
ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
AIA74978.1
Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
AIA73288.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.942
AIA73289.1
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.907
AIA73282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.802
AIA73279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.778
AIA74128.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.749
AIA75929.1
Kinesin K39; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.714
AIA75369.1
Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.712
AIA73281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.708
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.