Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
AIA74977.1ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (712 aa)    
Predicted Functional Partners:
AIA74976.1
Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
AIA74978.1
Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.963
AIA73287.1
Secretion protein HylD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.943
AIA73288.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.910
AIA73289.1
Agglutination protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.859
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
     
0.841
AIA73282.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
AIA73279.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.795
AIA73281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.731
AIA73280.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.666
Your Current Organism:
Halomonas campaniensis
NCBI taxonomy Id: 213554
Other names: ATCC BAA-966, DSM 15293, H. campaniensis, Halomonas campaniae, Halomonas campaniensis Romano et al. 2005, Halomonas campisalis subsp. campaniae, strain 5AG
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