STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63200.1Sugar phosphate isomerase/epimerase. (257 aa)    
Predicted Functional Partners:
AKB63346.1
Myo-inositol 2-dehydrogenase.
  
 
 0.838
AKB63377.1
Myo-inositol 2-dehydrogenase.
  
 
 0.838
AKB64748.1
Fructokinase.
  
 
 0.771
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.771
AKB66329.1
Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase.
 
 
 0.751
AKB63293.1
D-arabino-3-hexulose 6-phosphate formaldehyde lyase; Hypothetical protein with distant similarity to Ribonuclease E inhibitor RraA (former MenG).
 
 
  0.662
AKB63199.1
DUF54 conserved in archaea; Belongs to the UPF0201 family.
 
    0.658
fae-hps
Formaldehyde activating enzyme; Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin; In the N-terminal section; belongs to the formaldehyde- activating enzyme family.
 
 
  0.615
AKB66122.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
 
  0.608
AKB65055.1
Putative methanogenesis marker protein 8.
  
     0.530
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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