STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63220.1FAD/FMN-containing dehydrogenase. (456 aa)    
Predicted Functional Partners:
AKB63221.1
Fe-S oxidoreductase; Homology to heterodisulfide reductase 2 iron-sulfur subunit.
 
 0.978
AKB64549.1
Haloacid dehalogenase-like hydrolase.
    
 0.949
AKB64335.1
Catalase.
  
 0.927
AKB65343.1
Catalase; Belongs to the catalase family.
  
 0.927
AKB65926.1
Catalase.
  
 0.927
AKB64044.1
Phosphoglycolate phosphatase, archaeal type; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
 0.913
AKB66034.1
CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D.
 
 0.885
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.880
AKB66183.1
Fe-S oxidoreductase; Homology to heterodisulfide reductase 2 iron-sulfur subunit.
 
 0.856
AKB65593.1
Transcriptional regulator.
 
   
 0.849
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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