STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63220.1FAD/FMN-containing dehydrogenase. (456 aa)    
Predicted Functional Partners:
AKB63221.1
Fe-S oxidoreductase; Homology to heterodisulfide reductase 2 iron-sulfur subunit.
 
 0.996
AKB64549.1
Haloacid dehalogenase-like hydrolase.
    
 0.944
AKB64044.1
Phosphoglycolate phosphatase, archaeal type; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
 0.906
AKB66034.1
CoB--CoM heterodisulfide reductase 2 iron-sulfur subunit D.
 
 0.862
fni
Isopentenyl-diphosphate delta-isomerase, FMN-dependent; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
 0.850
AKB66183.1
Fe-S oxidoreductase; Homology to heterodisulfide reductase 2 iron-sulfur subunit.
 
 0.835
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
 
 
 
 0.800
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
   
 
 0.758
AKB63218.1
Ribosomal-protein-S18p-alanine acetyltransferase.
  
    0.754
AKB63219.1
Archaeosine tRNA-ribosyltransferase type 2.
       0.738
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.