STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63231.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
AKB63354.1
Hypothetical protein.
  
     0.564
AKB66020.1
Hypothetical protein.
  
     0.492
AKB65225.1
Hypothetical protein.
  
     0.474
AKB63230.1
Hypothetical protein.
       0.469
AKB66044.1
Phosphoserine phosphatase.
  
     0.466
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.464
AKB65223.1
Hypothetical protein.
  
     0.461
AKB64783.1
Hypothetical protein.
 
     0.452
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
 
     0.450
AKB65876.1
PQQ enzyme repeat domain protein.
 
     0.448
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.