Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB63255.1Putative heat shock protein. (165 aa)    
Predicted Functional Partners:
AKB63254.1
Putative heat shock protein; Belongs to the small heat shock protein (HSP20) family.
 
  
 
0.967
AKB64018.1
HSP20 type chaperone; Belongs to the small heat shock protein (HSP20) family.
    
 0.920
AKB66440.1
Small heat shock protein HSP16.5; Belongs to the small heat shock protein (HSP20) family.
    
 0.920
AKB63253.1
Cell division protein FtsH.
 
 
 0.758
AKB63931.1
Hypothetical protein.
 
   
 0.652
AKB63252.1
Archaeal heat shock regulator, ArsR family.
 
   
 0.643
AKB65890.1
Hypothetical protein.
 
   
 0.633
AKB63645.1
Hypothetical protein; Involved in DNA damage repair; Belongs to the Nre family.
  
     0.616
AKB64052.1
Cell division protein FtsH.
 
 
 0.604
AKB64249.1
Cell division protein FtsH.
 
 
 0.592
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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