STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63324.1Hypothetical protein. (379 aa)    
Predicted Functional Partners:
AKB65765.1
Polysaccharide deacetylase.
 
     0.718
AKB63325.1
Glycosyl transferase, group 1.
 
     0.592
AKB63371.1
Hypothetical protein.
 
     0.561
AKB63344.1
Hypothetical protein.
 
     0.558
AKB63323.1
Glycosyltransferase.
 
     0.508
AKB63326.1
Hypothetical protein.
       0.482
AKB63378.1
Hypothetical protein.
 
  
 0.455
AKB63345.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
   
 0.442
rnp3
Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family.
  
     0.440
AKB63320.1
Hypothetical protein.
 
     0.413
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.