STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63329.1Hypothetical protein. (524 aa)    
Predicted Functional Partners:
AKB65776.1
Hypothetical protein.
 
     0.610
AKB65777.1
Heterodisulfide reductase subunit A-like protein.
 
     0.573
AKB65677.1
Conserved membrane protein.
  
     0.479
AKB63328.1
Polysaccharide pyruvyl transferase.
       0.447
AKB63850.1
Hypothetical protein.
  
     0.440
AKB65935.1
Digeranylgeranylglyceryl phosphate synthase.
  
     0.417
AKB63707.1
Metallo-beta-lactamase family protein.
  
     0.416
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
       0.403
AKB63331.1
dTDP-4-dehydrorhamnose reductase.
       0.403
AKB63332.1
dTDP-glucose 4,6-dehydratase.
       0.403
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.