STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63347.1UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (360 aa)    
Predicted Functional Partners:
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
 
  
 0.992
AKB63346.1
Myo-inositol 2-dehydrogenase.
 
 0.980
AKB63348.1
Acetyltransferase.
 
 0.957
AKB63377.1
Myo-inositol 2-dehydrogenase.
 
 0.946
AKB65767.1
4-keto-6-deoxy-N-Acetyl-D-hexosaminyl-(Lipid carrier) aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
  
 
0.927
AKB63332.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.888
AKB63345.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.881
AKB63314.1
UDP-glucose 4-epimerase.
 
 
 0.681
AKB66226.1
Acetyltransferase (isoleucine patch superfamily).
 
 
 0.679
AKB63337.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.663
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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