STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63354.1Hypothetical protein. (1095 aa)    
Predicted Functional Partners:
AKB65225.1
Hypothetical protein.
  
     0.708
AKB66237.1
Hypothetical protein.
  
     0.708
AKB65223.1
Hypothetical protein.
  
     0.701
AKB64637.1
Hypothetical protein.
  
     0.699
AKB66220.1
Hypothetical protein.
  
     0.697
AKB66020.1
Hypothetical protein.
  
     0.690
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.680
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
  
     0.671
AKB66153.1
Hypothetical protein.
  
     0.669
AKB65876.1
PQQ enzyme repeat domain protein.
  
     0.668
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.