Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB63366.1UDP-glucose 4-epimerase. (316 aa)    
Predicted Functional Partners:
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.984
AKB63367.1
UTP--glucose-1-phosphate uridylyltransferase.
 
 
 0.980
AKB64194.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.979
AKB63368.1
UDP-glucose 6-dehydrogenase.
 0.978
AKB64197.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.978
rpl2
LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 0.967
AKB63919.1
Galactose-1-phosphate uridylyltransferase.
 
 
 0.956
AKB65671.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.955
AKB64120.1
Mannose-1-phosphate guanylyltransferase.
 
 0.928
rps28e
SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.
  
 0.904
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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