STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63371.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
AKB63370.1
Hypothetical protein.
 
     0.906
AKB63372.1
Glycosyltransferase.
 
     0.847
AKB63374.1
Hypothetical protein.
 
     0.754
AKB63373.1
Glycosyltransferase (group I).
  
  
 0.661
AKB65770.1
Glycosyltransferase.
 
  
 0.650
AKB65769.1
Hypothetical protein.
 
     0.591
AKB64788.1
Transcriptional regulator.
 
     0.576
AKB66370.1
Putative transcriptional regulators.
 
     0.569
AKB63324.1
Hypothetical protein.
 
     0.561
AKB65765.1
Polysaccharide deacetylase.
 
     0.561
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.