STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63371.1Hypothetical protein. (349 aa)    
Predicted Functional Partners:
AKB63370.1
Hypothetical protein.
 
     0.908
AKB63372.1
Glycosyltransferase.
 
     0.854
AKB63374.1
Hypothetical protein.
 
     0.756
AKB63373.1
Glycosyltransferase (group I).
  
  
 0.656
AKB65769.1
Hypothetical protein.
 
     0.600
AKB64788.1
Transcriptional regulator.
 
     0.576
AKB63324.1
Hypothetical protein.
 
     0.571
AKB66370.1
Putative transcriptional regulators.
 
     0.569
AKB65765.1
Polysaccharide deacetylase.
 
     0.565
AKB66292.1
Hypothetical protein.
 
     0.565
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.