Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63374.1Hypothetical protein. (335 aa)    
Predicted Functional Partners:
AKB63371.1
Hypothetical protein.
 
     0.756
AKB63370.1
Hypothetical protein.
 
     0.697
AKB63373.1
Glycosyltransferase (group I).
 
     0.649
AKB66370.1
Putative transcriptional regulators.
  
     0.642
AKB65445.1
Hypothetical protein; Similar to cytochrome C-type biogenesis protein CcdA.
  
     0.630
AKB63344.1
Hypothetical protein.
 
     0.583
AKB66237.1
Hypothetical protein.
  
     0.581
AKB65876.1
PQQ enzyme repeat domain protein.
  
     0.577
AKB66078.1
Hypothetical protein.
  
     0.576
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.568
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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