STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63382.1Polysaccharide deacetylase. (301 aa)    
Predicted Functional Partners:
AKB65766.1
FemAB-related protein, PEP-CTERM system-associated.
 
     0.685
AKB66212.1
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase family protein.
 
  
 0.616
AKB66211.1
Glycosyl transferase family 2.
 
  
 0.602
AKB65770.1
Glycosyltransferase.
  
  
 0.540
AKB63851.1
Putative glycosyl transferase.
 
 
 0.534
AKB63854.1
Glycosyltransferase.
 
 
 0.502
AKB63361.1
Glycosyl transferase, family 2.
 
 
 0.494
AKB63853.1
Beta-1,3-glucosyltransferase.
 
 
 0.486
AKB63357.1
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase.
 
 
 0.479
AKB63378.1
Hypothetical protein.
 
 
 0.477
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.