STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63429.1Two-component response regulator. (121 aa)    
Predicted Functional Partners:
AKB63552.1
Sensory transduction histidine kinase.
 
     0.973
AKB65274.1
Sensory transduction histidine kinase.
 
 0.950
AKB64781.1
Hypothetical protein.
 
 0.945
AKB64779.1
Hypothetical protein.
 
 0.923
AKB65032.1
Sensory transduction histidine kinase.
 
 0.921
AKB65149.1
Sensory transduction histidine kinase.
 
 0.891
AKB65707.1
Two component system histidine kinase.
 
     0.817
AKB65029.1
Sensory transduction histidine kinase.
    
0.548
AKB65381.1
Hypothetical protein.
    
0.542
cheB
Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.531
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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