STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63434.1Hydrogenase-4 component E. (228 aa)    
Predicted Functional Partners:
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
 
 
 0.992
AKB63435.1
Formate hydrogenlyase subunit 4.
 
 
 0.989
AKB63433.1
Hydrogenase-4 component F.
 
 
 0.984
AKB63436.1
Hydrogenase, HycC subunit, putative.
 
 
 0.984
AKB63431.1
Hydrogenase, group 4, HycG subunit, putative.
 
 
 0.963
AKB65573.1
Energy-conserving hydrogenase (ferredoxin), subunit E.
 
 
 0.871
AKB65576.1
Energy-conserving hydrogenase (ferredoxin), subunit B.
 
 
 0.863
AKB65575.1
Energy-conserving hydrogenase (ferredoxin), subunit C.
  
 
 0.832
AKB65577.1
Energy-conserving hydrogenase (ferredoxin), subunit A.
 
  
 0.574
AKB64407.1
CO dehydrogenase iron-sulfur protein CooF.
    
 0.562
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.