STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63443.1Hypothetical protein. (84 aa)    
Predicted Functional Partners:
AKB65957.1
Hypothetical protein.
 
 
 
 0.837
AKB64362.1
Hypothetical protein.
 
     0.764
AKB64498.1
Hypothetical protein.
 
     0.688
AKB64499.1
Hypothetical protein.
  
     0.539
AKB63444.1
Chromosomal protein MC1.
       0.475
AKB65958.1
Hypothetical protein.
  
     0.454
AKB64293.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.