STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63446.1Arsenic efflux pump protein. (429 aa)    
Predicted Functional Partners:
AKB63932.1
Arsenate reductase.
  
 
 0.637
AKB65648.1
Arsenate reductase.
  
 
 0.637
AKB66406.1
Universal stress protein.
     
 0.554
AKB63445.1
Hypothetical protein.
       0.527
AKB64650.1
Putative low-affinity inorganic phosphate transporter.
  
  
 0.490
tatC-2
Twin-arginine translocation protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
     
 0.481
AKB66400.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
     
 0.469
AKB63447.1
Hypothetical protein.
       0.455
AKB65528.1
6-phospho-3-hexuloisomerase.
 
  
 0.414
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.