STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63455.1Transcriptional regulator. (87 aa)    
Predicted Functional Partners:
AKB63454.1
Transporter.
  
  
 0.912
AKB63456.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
     0.797
AKB63457.1
ATPase component BioM of energizing module of biotin ECF transporter.
       0.721
AKB63458.1
ATPase component BioM of energizing module of biotin ECF transporter.
       0.713
AKB63459.1
Substrate-specific component BioY of biotin ECF transporter.
       0.680
AKB63661.1
Transcriptional regulator, ArsR family.
 
   
 0.580
AKB63453.1
PspC domain protein.
  
  
 0.564
AKB65650.1
Transcriptional regulator, ArsR family.
 
   
 0.435
AKB63847.1
Transcriptional regulator, ArsR family.
 
   
 0.420
AKB66400.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
  
  
 0.414
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.