STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AKB63457.1ATPase component BioM of energizing module of biotin ECF transporter. (287 aa)    
Predicted Functional Partners:
AKB63456.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 0.997
AKB63458.1
ATPase component BioM of energizing module of biotin ECF transporter.
 
  
 
0.997
AKB63459.1
Substrate-specific component BioY of biotin ECF transporter.
 
 
 0.992
AKB64860.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.979
AKB65506.1
Transmembrane component of energizing module of predicted tryptophan ECF transporter.
 
 0.975
AKB65881.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.967
AKB64037.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
  
 0.931
AKB63614.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.856
AKB66024.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
   
0.784
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.
  
 
 0.741
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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