close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63457.1ATPase component BioM of energizing module of biotin ECF transporter. (287 aa)    
Predicted Functional Partners:
AKB63456.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 0.994
AKB64860.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.986
AKB65506.1
Transmembrane component of energizing module of predicted tryptophan ECF transporter.
 
 0.983
AKB63458.1
ATPase component BioM of energizing module of biotin ECF transporter.
 
  
 
0.981
AKB63459.1
Substrate-specific component BioY of biotin ECF transporter.
 
 
 0.981
AKB65881.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.978
AKB64037.1
Transmembrane component CbiQ of energizing module of cobalt ECF transporter.
  
 0.882
AKB63614.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 0.855
AKB63607.1
Substrate-specific component NikM of nickel ECF transporter.
 
 0.835
cbiM
Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.
  
 0.800
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.