STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63459.1Substrate-specific component BioY of biotin ECF transporter. (187 aa)    
Predicted Functional Partners:
AKB63456.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
 
 0.994
AKB63458.1
ATPase component BioM of energizing module of biotin ECF transporter.
 
 
 0.993
AKB63457.1
ATPase component BioM of energizing module of biotin ECF transporter.
 
 
 0.992
AKB65506.1
Transmembrane component of energizing module of predicted tryptophan ECF transporter.
 
 0.952
AKB64860.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.951
AKB65881.1
Transmembrane component of general energizing module of ECF transporters.
 
 0.950
AKB66048.1
Biotin operon repressor; Biotin-protein ligase.
 
   
 0.878
AKB63615.1
ATPase component NikO of energizing module of nickel ECF transporter; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
 
 0.835
AKB66049.1
Pyruvate carboxyl transferase subunit A.
 
  
  0.765
AKB63614.1
Transmembrane component NikQ of energizing module of nickel ECF transporter.
 
 
 0.744
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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