Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB63508.1Putative transcriptional regulator. (121 aa)    
Predicted Functional Partners:
AKB63509.1
Ferredoxin.
 
  
 0.956
AKB63510.1
Hypothetical protein.
 
  
 0.955
AKB63507.1
Hypothetical protein.
 
    
0.903
AKB63505.1
Cytosolic Fe-S cluster assembling factor NBP35; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
 
  
 0.808
AKB63411.1
7,8 dihydropteroate synthase (methanopterin).
 
     0.744
AKB63506.1
HTH DNA-binding protein.
 
  
 0.684
AKB63788.1
Nitrogenase FeMo-cofactor scaffold and assembly protein NifN.
  
 0.595
AKB63789.1
Nitrogenase FeMo-cofactor scaffold and assembly protein NifE; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.595
AKB63790.1
Nitrogenase (molybdenum-iron) beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
  
 0.595
AKB63791.1
Nitrogenase (molybdenum-iron) alpha chain.
  
 0.595
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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