STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63526.1Hypothetical protein. (242 aa)    
Predicted Functional Partners:
AKB63527.1
Hypothetical protein.
       0.681
AKB64788.1
Transcriptional regulator.
  
   
 0.561
AKB64617.1
Mobile element protein.
  
     0.557
AKB64239.1
Mobile element protein.
  
     0.555
AKB64756.1
Putative hydrolase.
  
     0.545
AKB63565.1
Hypothetical protein.
  
     0.544
AKB66370.1
Putative transcriptional regulators.
  
   
 0.523
AKB66121.1
Hypothetical protein.
  
     0.519
AKB66190.1
Signal peptidase, type IV - prepilin/preflagellin.
  
     0.517
AKB64835.1
Glycosyltransferase.
  
     0.508
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.