STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63532.1Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family. (503 aa)    
Predicted Functional Partners:
AKB63845.1
Glutamate synthase [NADPH] small chain.
 0.999
AKB63533.1
Glutamine amidotransferase, class-II.
 
 0.997
AKB63531.1
Glutamate synthase [NADPH] putative GlxC chain.
 
 
  0.993
AKB63530.1
Coenzyme F420 hydrogenase subunit beta.
 
    0.948
AKB63535.1
Glutamine synthetase type I.
  
 
 0.930
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
  
 
 0.904
AKB64141.1
Glutamate dehydrogenase 2; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.876
AKB64585.1
NAD-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.876
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
 
 0.817
gatD
Glutamyl-tRNA(Gln) amidotransferase asparaginase subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
    
 0.814
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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