STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63533.1Glutamine amidotransferase, class-II. (350 aa)    
Predicted Functional Partners:
AKB63531.1
Glutamate synthase [NADPH] putative GlxC chain.
 
 0.999
AKB63532.1
Glutamate synthase [NADPH] large chain; Belongs to the glutamate synthase family.
 
 0.997
AKB63845.1
Glutamate synthase [NADPH] small chain.
  
 0.994
AKB63530.1
Coenzyme F420 hydrogenase subunit beta.
 
    0.931
AKB66297.1
Formylmethanofuran dehydrogenase (molybdenum) subunit C.
 
 0.892
AKB65898.1
Formylmethanofuran dehydrogenase subunit C.
 
 0.890
AKB63535.1
Glutamine synthetase type I.
  
 
 0.833
AKB65118.1
Asparagine synthetase (glutamine-hydrolyzing).
  
 
 0.813
pdxT
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.
    
  0.789
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
    
 0.763
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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