STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63543.1Nitrogen regulatory protein P-II; Belongs to the P(II) protein family. (115 aa)    
Predicted Functional Partners:
AKB63544.1
Ammonium transporter.
 
 0.996
AKB63780.1
Ammonium transporter.
 
 0.938
argB
Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
   
 
 0.759
AKB63705.1
ADP-ribosylglycohydrolase.
   
 
 0.713
AKB63796.1
Hypothetical protein.
   
 
 0.598
AKB63904.1
TPR-domain containing protein.
   
 
 0.598
AKB64319.1
Hypothetical protein.
   
 
 0.598
AKB64369.1
Hypothetical protein.
   
 
 0.598
AKB64423.1
Cellulose synthase subunit BcsC.
   
 
 0.598
AKB64427.1
Vi polysaccharide export protein VexE.
   
 
 0.598
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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