STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB63547.1ABC transporter, ATP-binding protein. (209 aa)    
Predicted Functional Partners:
AKB63549.1
ABC transporter, permease protein.
 0.990
AKB64782.1
Cell division protein FtsX.
 0.986
AKB63553.1
ABC transporter, permease protein.
 0.984
AKB64864.1
ABC transporter, permease protein.
 0.984
AKB66233.1
ABC transporter, permease protein.
 0.982
AKB65020.1
ABC transporter, permease protein.
 0.969
AKB66256.1
ABC transporter, permease protein.
 0.924
AKB65235.1
ABC transporter, permease protein.
  
 0.775
AKB63548.1
Hypothetical protein.
       0.713
AKB65332.1
ABC transporter, ATP-binding protein.
 
  
0.627
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.