Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB63568.1Lysine 2,3-aminomutase. (419 aa)    
Predicted Functional Partners:
AKB63567.1
Beta-lysine acetyltransferase.
  
 0.990
AKB66416.1
Proline 2-methylase for pyrrolysine biosynthesis.
    
 0.849
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
    
 0.817
AKB66417.1
Pyrrolysine synthetase.
    
  0.802
AKB64888.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
      
 0.751
AKB65323.1
Pyruvate formate lyase-activating enzyme 1.
      
 0.751
AKB65337.1
Molybdenum cofactor biosynthesis protein A.
      
 0.751
AKB66492.1
Ribonucleotide reductase of class III (anaerobic), activating protein.
      
 0.751
AKB64172.1
Chemotaxis protein methyltransferase CheR.
   
   0.722
AKB66534.1
Chemotaxis protein methyltransferase CheR.
   
   0.722
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.